{"id":241,"date":"2020-06-17T08:17:57","date_gmt":"2020-06-17T08:17:57","guid":{"rendered":"https:\/\/mri.sbollmann.net\/?p=241"},"modified":"2020-06-17T08:18:26","modified_gmt":"2020-06-17T08:18:26","slug":"containers-for-neuroscience-at-ohbm-brainhack-trainhack-2020","status":"publish","type":"post","link":"https:\/\/mri.sbollmann.net\/index.php\/2020\/06\/17\/containers-for-neuroscience-at-ohbm-brainhack-trainhack-2020\/","title":{"rendered":"Containers for neuroscience at OHBM Brainhack Trainhack 2020"},"content":{"rendered":"\n<p><a href=\"https:\/\/twitter.com\/tomcat992\" target=\"_blank\" rel=\"noreferrer noopener\">Tom Shaw<\/a> and I prepared a talk for this year&#8217;s OHBM Brainhack Trainhack where we show what containers are and how to use them for neuroscience applications. We cover docker and singularity and show how to build and run containers on different computing platforms.<\/p>\n\n\n\n<p>Video: <\/p>\n\n\n\n<figure class=\"wp-block-embed-youtube wp-block-embed is-type-video is-provider-youtube wp-embed-aspect-16-9 wp-has-aspect-ratio\"><div class=\"wp-block-embed__wrapper\">\n<iframe loading=\"lazy\" title=\"Containers for Neuroscience - OHBM Brainhack Trainhack 2020\" width=\"750\" height=\"422\" src=\"https:\/\/www.youtube.com\/embed\/-5ofpEMq8ow?feature=oembed\" frameborder=\"0\" allow=\"accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture\" allowfullscreen><\/iframe>\n<\/div><\/figure>\n\n\n\n<p>Code to hack along: <a href=\"https:\/\/hackmd.io\/ep87sx8ERMWFYc4D0FisRw\" target=\"_blank\" rel=\"noreferrer noopener\">https:\/\/hackmd.io\/ep87sx8ERMWFYc4D0FisRw<\/a><\/p>\n\n\n\n<p>Slides: <\/p>\n\n\n<a href=\"https:\/\/mri.sbollmann.net\/wp-content\/uploads\/2020\/06\/ContainersForScience_pdfversion_small.pdf\" class=\"pdfemb-viewer\" style=\"\" data-width=\"max\" data-height=\"max\" data-toolbar=\"bottom\" data-toolbar-fixed=\"off\">ContainersForScience_pdfversion_small<\/a>\n<p class=\"wp-block-pdfemb-pdf-embedder-viewer\"><\/p>\n\n\n\n<div class=\"wp-block-file\"><a href=\"https:\/\/mri.sbollmann.net\/wp-content\/uploads\/2020\/06\/ContainersForScience_pdfversion_small.pdf\">ContainersForScience_pdfversion_small<\/a><a href=\"https:\/\/mri.sbollmann.net\/wp-content\/uploads\/2020\/06\/ContainersForScience_pdfversion_small.pdf\" class=\"wp-block-file__button\" download>Download<\/a><\/div>\n","protected":false},"excerpt":{"rendered":"<p>Tom Shaw and I prepared a talk for this year&#8217;s OHBM Brainhack Trainhack where we show what containers are and how to use them for neuroscience applications. We cover docker and singularity and show how to build and run containers on different computing platforms. Video: Code to hack along: https:\/\/hackmd.io\/ep87sx8ERMWFYc4D0FisRw [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":243,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[25,18,3,12],"tags":[],"class_list":["post-241","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-containers","category-functional-imaging","category-reproducibility","category-talks"],"jetpack_featured_media_url":"https:\/\/mri.sbollmann.net\/wp-content\/uploads\/2020\/06\/image-17.png","_links":{"self":[{"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/posts\/241","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/comments?post=241"}],"version-history":[{"count":3,"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/posts\/241\/revisions"}],"predecessor-version":[{"id":246,"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/posts\/241\/revisions\/246"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/media\/243"}],"wp:attachment":[{"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/media?parent=241"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/categories?post=241"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/mri.sbollmann.net\/index.php\/wp-json\/wp\/v2\/tags?post=241"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}